A1 Alkuperäisartikkeli tieteellisessä aikakauslehdessä
Archaea in boreal Swedish lakes are diverse, dominated by Woesearchaeota and follow deterministic community assembly (2020)
Juottonen, H.; Fontaine, L.; Wurzbacher, C.; Drakare, S.; Peura, S.; Eiler, A. (2020). Archaea in boreal Swedish lakes are diverse, dominated by Woesearchaeota and follow deterministic community assembly. Environmental Microbiology, 22 (8), 3158–3171. DOI: 10.1111/1462-2920.15058
JYU-tekijät tai -toimittajat
Julkaisun tiedot
Julkaisun kaikki tekijät tai toimittajat: Juottonen, H.; Fontaine, L.; Wurzbacher, C.; Drakare, S.; Peura, S.; Eiler, A.
Lehti tai sarja: Environmental Microbiology
ISSN: 1462-2912
eISSN: 1462-2920
Julkaisuvuosi: 2020
Volyymi: 22
Lehden numero: 8
Artikkelin sivunumerot: 3158–3171
Kustantaja: Wiley-Blackwell
Julkaisumaa: Britannia
Julkaisun kieli: englanti
DOI: https://doi.org/10.1111/1462-2920.15058
Avoin saatavuus: Hybridijulkaisukanavassa ilmestynyt avoin julkaisu
Julkaisu on rinnakkaistallennettu (JYX): https://jyx.jyu.fi/handle/123456789/68871
Tiivistelmä
Despite their key role in biogeochemical processes, particularly the methane cycle, archaea are widely underrepresented in molecular surveys because of their lower abundance compared to bacteria and eukaryotes. Here, we use parallel high‐resolution small subunit rRNA gene sequencing to explore archaeal diversity in 109 Swedish lakes and correlate archaeal community assembly mechanisms to large‐scale latitudinal, climatic (nemoral to arctic), and nutrient (oligotrophic to eutrophic) gradients. Sequencing with universal primers showed the contribution of archaea was on average 0.8% but increased up to 1.5% of the three domains in forest lakes. Archaea‐specific sequencing revealed that freshwater archaeal diversity could be partly explained by lake variables associated with nutrient status. Combined with deterministic co‐occurrence patterns this finding suggests that ecological drift is overridden by environmental sorting, as well as other deterministic processes such as biogeographic and evolutionary history, leading to lake‐specific archaeal biodiversity. Acetoclastic, hydrogenotrophic and methylotrophic methanogens as well as ammonia‐oxidizing archaea were frequently detected across the lakes. Archaea‐specific sequencing also revealed representatives of Woesearchaeota and other phyla of the DPANN superphylum. This study adds to our understanding of the ecological range of key archaea in freshwaters and links these taxa to hypotheses about processes governing biogeochemical cycles in lakes.
YSO-asiasanat: järvet; arkeonit; aineiden kierto; makea vesi; ekosysteemit; limnologia; mikrobiologia
Liittyvät organisaatiot
OKM-raportointi: Kyllä
Alustava JUFO-taso: 2