Dataset for Mucin induces CRISPR-Cas defense in an opportunistic pathogen
Hoikkala, Ville; Rantanen, Noora; Sundberg, Lotta-Riina; Ravantti, Janne; Almeida, Gabriel MF. (2022). Dataset for Mucin induces CRISPR-Cas defense in an opportunistic pathogen. V. 24.5.2022. University of Jyväskylä. https://doi.org/10.17011/jyx/dataset/81288.
JYU authors:
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All authors: Hoikkala, Ville; Rantanen, Noora; Sundberg, Lotta-Riina; Ravantti, Janne; Almeida, Gabriel MF
Funders: Research Council of Finland
Right-holders:
Availability and identifiers
Availability: Direct download
Publication year: 2022
URN identifier in original repository: http://urn.fi/URN:NBN:fi:jyu-202205252912
DOI identifier in original repository: https://doi.org/10.17011/jyx/dataset/81288
URN identifier in JYX: http://urn.fi/URN:NBN:fi:jyu-202205252912
DOI identifier in JYX: https://doi.org/10.17011/jyx/dataset/81288
Description of the dataset
Description: This dataset contains raw data points of (1) phage-bacterium co-evolution experiment (flavobacterium columnare colony counts, phage counts, bacterial growth characteristics and number of CRISPR-Cas spacers) and (2) from competition experiment between Flavobacterium columnare and Aeromonas sp. For detailed method description, see the attached Documentation file.
Language: English
Free keywords: bacteria, phage, CRISPR, competition, evolution, resistance
Keywords (YSO): bacteria; evolution; phage therapy
Fields of science: 1181 Ecology, evolutionary biology; 1184 Genetics, developmental biology, physiology
Follow-up groups: Cell and Molecular Biology (Department of Biological and Environmental Science BIOENV) SMB; School of Resource Wisdom (University of Jyväskylä JYU) JYU.Wisdom; Nanoscience Center (Department of Physics PHYS, JYFL) (Faculty of Mathematics and Science) (Department of Chemistry CHEM) (Department of Biological and Environmental Science BIOENV) NSC
Do you deal with data concerning special categories of personal data in your research?: No
Projects related to dataset
- CRISPR and antagonistic coevolution with bacterial viruses – linking molecular evolution of both host and its parasite
- Sundberg, Lotta-Riina
- Research Council of Finland